Commit Graph

18 Commits

Author SHA1 Message Date
f043f7c67d
turnbull: Introduce analytical solution to computing Hessian
Makes runtime of computing Hessian negligible!
2023-10-20 20:47:49 +11:00
0a8c77fa2c
turnbull: Refactor to aid profiling 2023-10-20 20:16:19 +11:00
dd24de5813
turnbull: Allow dropping columns/rows of Hessian corresponding to intervals with zero failure probability 2023-10-20 20:15:56 +11:00
67ce046522
Implement turnbull 2023-10-14 06:20:15 +11:00
6c5ab0dd60
Transpose data_time_indexes in memory to avoid unnecessary matrix transposition 2023-05-01 00:13:32 +10:00
1c08116f10
Avoid unnecessary Vec reallocations when computing time_points 2023-04-30 15:59:42 +10:00
8aad020521
Fix help text references to E-M algorithm 2023-04-30 15:46:13 +10:00
14c1944f92
Improve performance
Avoid unnecessary zeroing of input data matrices
2023-04-30 15:45:55 +10:00
a1bb1568ad
Tidy update_beta 2023-04-29 18:29:33 +10:00
a58a52f682
Improve performance
Mostly, use BLAS functions to reduce unnecessary allocations for intermediate steps
2023-04-29 17:39:25 +10:00
cdc59da178
Change to ICM/Newton-Raphson algorithm 2023-04-29 00:37:30 +10:00
1497e2d5cb
Add --ll_tolerance parameter for intcox 2023-04-23 18:36:28 +10:00
45585a2b38
Add comments to M step 2023-04-22 23:57:17 +10:00
461eb8db5f
Parse CSV robustly 2023-04-21 17:40:43 +10:00
f6f44c64ab
Force progress bar to output to stderr even when not a terminal 2023-04-21 17:21:33 +10:00
9893657bb0
Also report and unit test cumulative hazard curve 2023-04-18 16:18:19 +10:00
6ac2d9f055
Add test for intcox 2023-04-18 15:32:27 +10:00
46e3b189ce
Initial commit 2023-04-17 17:50:43 +10:00