Commit Graph

90 Commits

Author SHA1 Message Date
e83aa88b19
Implement yli.kaplanmeier 2023-02-25 17:15:22 +11:00
642d0d4e4f
Implement likelihood ratio test for Cox regression 2023-02-25 15:08:09 +11:00
eb0d520d95
Add support for statsmodels PHReg to yli.regress 2023-02-25 14:46:13 +11:00
fa95f6d75c
Add exposure kwarg to yli.regress, for Poisson etc. 2023-02-25 14:12:44 +11:00
17bf3cbcab
Add helper function set up graph fonts 2023-02-07 18:50:15 +11:00
967b853b02
Implement utilities for SHAP values in regression 2023-02-07 18:50:07 +11:00
dbebc3b8e9
Autodetect ordinal variables in auto_univariable 2023-02-07 18:49:57 +11:00
68d7a31b53
Add documentation for auto_correlations 2023-02-07 18:49:00 +11:00
c2d4aaf8be
Implement yli.auto_correlations 2022-12-03 22:23:29 +11:00
5dce873e55
Add helper function for making dtype ordinal (ordered category) 2022-12-03 22:23:18 +11:00
0fa261498a
In auto_descriptives, autodetect ordinal variables based on category dtype 2022-12-03 22:20:42 +11:00
5633a191f1
Update documentation 2022-12-03 20:01:05 +11:00
fa89f2f156
Implement yli.spearman 2022-12-03 20:00:52 +11:00
56e16bc71d
Fixups and update documentation 2022-12-03 02:02:34 +11:00
957ef9f3fc
Add documentation for RegressionResult.brant 2022-12-03 01:59:54 +11:00
b2a72a8ef8
Add unit test for RegressionResult.brant 2022-12-03 01:59:54 +11:00
ea2d04ada1
Add unit test for OrdinalLogit 2022-12-03 01:59:54 +11:00
2135796d85
Automatically factorise pandas categorical when required for regression 2022-12-02 21:42:41 +11:00
04643d312c
Add unit test for RegressionResult.bootstrap 2022-12-02 21:07:08 +11:00
e4e85db354
Refactor bootstrap regression API as method of RegressionResult 2022-12-02 21:04:58 +11:00
4d59e1a521
Refactor Brant test API as method of RegressionResult 2022-12-02 20:47:35 +11:00
fc8303678f
Initial implementation of Brant test 2022-12-02 20:47:34 +11:00
0dab62ad0a
Implement yli.OrdinalLogit as preferred model for ordinal logistic regression
OrdinalLogit uses a parameterisation where the cutoff terms are directly incorporated
2022-12-02 20:47:11 +11:00
f8e56d96b1
Add "method" parameter for yli.regress 2022-12-02 12:54:03 +11:00
a48e96e96c
Handle OrderedModel for yli.regress 2022-12-02 12:53:50 +11:00
5b08784498
Ignore ModuleNotFoundError in yli.reload 2022-11-29 23:08:31 +11:00
645cb7a85e
Rename bootstrap_regress to regress_bootstrap and update
Improve performance by directly calling statsmodels regression
Report bootstrap in model summary
Add to documentation
2022-11-29 23:00:14 +11:00
e71a1aea12
Implement bootstrap_regress 2022-11-29 14:40:50 +11:00
e268f385be
Implement yli.auto_descriptives 2022-11-10 21:20:06 +11:00
c3eef0efea
In auto_univariable, omit NaN only from affected analyses 2022-11-10 18:51:35 +11:00
f80afd0e80
Allow check_nan to only consider certain columns 2022-11-10 18:51:35 +11:00
040aa2d463
Implement convert_pandas_nullable for pandas nullable boolean dtype 2022-11-10 18:46:54 +11:00
ed67a4a610
Make nan_policy defaults consistent
Should default to 'warn' always
2022-11-10 18:28:27 +11:00
e5833796af
Add auto_univariable 2022-11-09 23:31:27 +11:00
ce4df2eac1
Show independent/dependent variables in t test and Mann-Whitney output 2022-11-09 22:25:50 +11:00
239a0646d2
Rename ConfidenceInterval to Interval 2022-11-09 22:10:15 +11:00
0f63b7eb40
Show descriptives in Mann-Whitney test output 2022-11-09 22:08:27 +11:00
ea2bf53ace
Display t test comparison of groups as table 2022-11-09 18:18:47 +11:00
d8dcece09d
Refactor fmt_p
Combine html, only_value, tabular flags into a single Flag
2022-11-09 17:39:53 +11:00
c6cef4aee7
Update documentation 2022-11-09 17:39:52 +11:00
50597ddc74
Update convert_pandas_nullable
Automatically convert pandas Float64 to float64 when required
Avoid unnecessary copy if possible
2022-11-09 17:39:52 +11:00
ab90cfc0e4
Report group means/SD for t test 2022-11-09 17:05:16 +11:00
bae93b2c8e
Fix bug when nan_policy='raise' 2022-10-20 20:59:06 +11:00
b31ae6686f
Make yli.mannwhitney support pandas nullable dtypes 2022-10-20 20:58:42 +11:00
ee36ac9d14
Add test and example for yli.pearsonr 2022-10-20 20:57:57 +11:00
5248abf859
Clarify documentation for Mann-Whitney test 2022-10-20 20:57:24 +11:00
05e5189fc5
Update global.rst documentation 2022-10-19 08:54:39 +11:00
d5ce46f6d0
Add example code/output to documentation 2022-10-19 08:49:44 +11:00
62c23efebc
Align tabular p values in plaintext output 2022-10-19 08:49:44 +11:00
a484b6205c
Add option to make __repr__ print the summary 2022-10-19 08:49:44 +11:00