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b2a72a8ef8
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Add unit test for RegressionResult.brant
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2022-12-03 01:59:54 +11:00 |
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ea2d04ada1
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Add unit test for OrdinalLogit
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2022-12-03 01:59:54 +11:00 |
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2135796d85
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Automatically factorise pandas categorical when required for regression
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2022-12-02 21:42:41 +11:00 |
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04643d312c
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Add unit test for RegressionResult.bootstrap
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2022-12-02 21:07:08 +11:00 |
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e4e85db354
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Refactor bootstrap regression API as method of RegressionResult
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2022-12-02 21:04:58 +11:00 |
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4d59e1a521
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Refactor Brant test API as method of RegressionResult
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2022-12-02 20:47:35 +11:00 |
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fc8303678f
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Initial implementation of Brant test
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2022-12-02 20:47:34 +11:00 |
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0dab62ad0a
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Implement yli.OrdinalLogit as preferred model for ordinal logistic regression
OrdinalLogit uses a parameterisation where the cutoff terms are directly incorporated
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2022-12-02 20:47:11 +11:00 |
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f8e56d96b1
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Add "method" parameter for yli.regress
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2022-12-02 12:54:03 +11:00 |
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a48e96e96c
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Handle OrderedModel for yli.regress
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2022-12-02 12:53:50 +11:00 |
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5b08784498
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Ignore ModuleNotFoundError in yli.reload
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2022-11-29 23:08:31 +11:00 |
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645cb7a85e
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Rename bootstrap_regress to regress_bootstrap and update
Improve performance by directly calling statsmodels regression
Report bootstrap in model summary
Add to documentation
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2022-11-29 23:00:14 +11:00 |
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e71a1aea12
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Implement bootstrap_regress
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2022-11-29 14:40:50 +11:00 |
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e268f385be
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Implement yli.auto_descriptives
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2022-11-10 21:20:06 +11:00 |
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c3eef0efea
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In auto_univariable, omit NaN only from affected analyses
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2022-11-10 18:51:35 +11:00 |
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f80afd0e80
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Allow check_nan to only consider certain columns
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2022-11-10 18:51:35 +11:00 |
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040aa2d463
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Implement convert_pandas_nullable for pandas nullable boolean dtype
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2022-11-10 18:46:54 +11:00 |
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ed67a4a610
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Make nan_policy defaults consistent
Should default to 'warn' always
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2022-11-10 18:28:27 +11:00 |
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e5833796af
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Add auto_univariable
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2022-11-09 23:31:27 +11:00 |
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ce4df2eac1
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Show independent/dependent variables in t test and Mann-Whitney output
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2022-11-09 22:25:50 +11:00 |
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239a0646d2
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Rename ConfidenceInterval to Interval
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2022-11-09 22:10:15 +11:00 |
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0f63b7eb40
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Show descriptives in Mann-Whitney test output
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2022-11-09 22:08:27 +11:00 |
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ea2bf53ace
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Display t test comparison of groups as table
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2022-11-09 18:18:47 +11:00 |
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d8dcece09d
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Refactor fmt_p
Combine html, only_value, tabular flags into a single Flag
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2022-11-09 17:39:53 +11:00 |
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c6cef4aee7
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Update documentation
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2022-11-09 17:39:52 +11:00 |
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50597ddc74
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Update convert_pandas_nullable
Automatically convert pandas Float64 to float64 when required
Avoid unnecessary copy if possible
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2022-11-09 17:39:52 +11:00 |
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ab90cfc0e4
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Report group means/SD for t test
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2022-11-09 17:05:16 +11:00 |
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bae93b2c8e
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Fix bug when nan_policy='raise'
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2022-10-20 20:59:06 +11:00 |
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b31ae6686f
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Make yli.mannwhitney support pandas nullable dtypes
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2022-10-20 20:58:42 +11:00 |
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ee36ac9d14
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Add test and example for yli.pearsonr
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2022-10-20 20:57:57 +11:00 |
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5248abf859
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Clarify documentation for Mann-Whitney test
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2022-10-20 20:57:24 +11:00 |
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05e5189fc5
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Update global.rst documentation
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2022-10-19 08:54:39 +11:00 |
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d5ce46f6d0
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Add example code/output to documentation
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2022-10-19 08:49:44 +11:00 |
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62c23efebc
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Align tabular p values in plaintext output
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2022-10-19 08:49:44 +11:00 |
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a484b6205c
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Add option to make __repr__ print the summary
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2022-10-19 08:49:44 +11:00 |
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57189990d6
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Write Sphinx documentation
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2022-10-19 08:49:44 +11:00 |
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7730ce476a
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Make PyCryptodome an optional dependency
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2022-10-19 08:49:44 +11:00 |
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3626d3037f
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Disallow specifying a salt for pickle_write_encrypted
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2022-10-19 08:49:43 +11:00 |
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12a0707998
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Move ConfidenceInterval to yli.utils
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2022-10-19 08:49:43 +11:00 |
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ca521ae529
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Make mpmath optional dependency
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2022-10-17 20:35:04 +11:00 |
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7a93355dab
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Show covariance matrix type in regression results
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2022-10-17 20:34:58 +11:00 |
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b24f675d57
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Don't show SciPy optimisation message in regression
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2022-10-17 20:34:36 +11:00 |
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4340be165b
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Fix RegressionResult.bayesfactor_beta_zero for categorical terms
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2022-10-16 02:49:43 +11:00 |
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78944c7966
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Implement yli.logit_then_regress
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2022-10-16 02:31:37 +11:00 |
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5cd04c3f6c
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Report if robust covariance matrix in regression
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2022-10-16 02:31:23 +11:00 |
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6206723713
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Add model_kwargs, fit_kwargs and common arguments to yli.regress
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2022-10-16 02:31:08 +11:00 |
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f407c5a44f
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Move dof_resid below dof_model in regression output
dof_model is the numerator in the F test so this makes more sense
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2022-10-16 02:30:24 +11:00 |
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349eebb202
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Rename δ -> Δμ for clarity
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2022-10-16 01:44:05 +11:00 |
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8d40e9db8b
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Improve formatting of tabular p values
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2022-10-15 23:30:41 +11:00 |
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a2442214ed
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Observe config.alpha for significance tests and regression
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2022-10-15 23:24:29 +11:00 |
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bf5cc434b5
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Allow customising p value formatting
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2022-10-15 23:11:22 +11:00 |
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49b9230484
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Rename fs -> io
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2022-10-15 14:07:54 +11:00 |
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70fba04b2f
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Regression output: Hide boolean reference categories by default if reference category is False
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2022-10-15 01:42:06 +11:00 |
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d1249914ff
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Allow cols_for_formula and reference category detection to support explicit contrasts
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2022-10-15 01:35:49 +11:00 |
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0391877296
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Refactor parsing of Patsy formulas
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2022-10-15 00:54:46 +11:00 |
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b2aaaabb0e
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Improve pretty printing of regression results
Pretty print categorical variables and show reference category
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2022-10-14 21:57:22 +11:00 |
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e8e97f6073
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Implement anova_oneway
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2022-10-14 20:18:25 +11:00 |
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a753761675
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Style fixups
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2022-10-14 20:08:01 +11:00 |
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255ad100fd
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Refactor fmt_p
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2022-10-14 14:48:26 +11:00 |
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526d361338
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Implement RegressionResult.bayesfactor_beta_zero
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2022-10-14 14:21:36 +11:00 |
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bb534cb285
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vif: Allow computing VIF only for variables in the formula
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2022-10-14 14:08:51 +11:00 |
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461e00df78
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Implement PenalisedLogit
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2022-10-13 17:23:29 +11:00 |
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51008296c2
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Implement vif
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2022-10-13 16:46:53 +11:00 |
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987520e700
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Implement regression helpers
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2022-10-13 16:46:53 +11:00 |
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e1051d8aff
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Implement utilities for saving/loading pandas DataFrames to/from file
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2022-10-13 15:58:27 +11:00 |
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7e8418eb36
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Implement chi2
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2022-10-13 15:58:27 +11:00 |
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edc82c1658
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Implement mannwhitney
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2022-10-13 13:18:51 +11:00 |
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6b43034a50
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Implement ttest_ind
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2022-10-13 12:53:18 +11:00 |
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97a01b4e80
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Implement ttest_ind
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2022-10-11 22:52:42 +11:00 |
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582cfa5893
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Implement transformed_dist
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2022-10-09 13:02:06 +11:00 |
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b8250054a2
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Implement truncated sum for calculating beta_oddsratio.cdf
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2022-10-07 22:12:55 +11:00 |
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cbb79207ae
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Implement beta_oddsratio
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2022-10-07 16:52:51 +11:00 |
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d3842e1645
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Implement hdi
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2022-10-06 18:47:24 +11:00 |
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fb1e03bfab
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Implement beta_ratio.from_scipy
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2022-10-05 21:50:16 +11:00 |
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006ddd2c41
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Publish beta ratio distribution
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2022-10-05 20:08:04 +11:00 |
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