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scipy-yli
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56 Commits

Author SHA1 Message Date
RunasSudo c6cef4aee7
Update documentation 2022-11-09 17:39:52 +11:00
RunasSudo 50597ddc74
Update convert_pandas_nullable 
Automatically convert pandas Float64 to float64 when required
Avoid unnecessary copy if possible
 2022-11-09 17:39:52 +11:00
RunasSudo ab90cfc0e4
Report group means/SD for t test 2022-11-09 17:05:16 +11:00
RunasSudo bae93b2c8e
Fix bug when nan_policy='raise' 2022-10-20 20:59:06 +11:00
RunasSudo b31ae6686f
Make yli.mannwhitney support pandas nullable dtypes 2022-10-20 20:58:42 +11:00
RunasSudo ee36ac9d14
Add test and example for yli.pearsonr 2022-10-20 20:57:57 +11:00
RunasSudo 5248abf859
Clarify documentation for Mann-Whitney test 2022-10-20 20:57:24 +11:00
RunasSudo 05e5189fc5
Update global.rst documentation 2022-10-19 08:54:39 +11:00
RunasSudo 66d7e70806
Add expected summary output to unit tests for examples in documentation 2022-10-19 08:49:44 +11:00
RunasSudo d5ce46f6d0
Add example code/output to documentation 2022-10-19 08:49:44 +11:00
RunasSudo 62c23efebc
Align tabular p values in plaintext output 2022-10-19 08:49:44 +11:00
RunasSudo a484b6205c
Add option to make __repr__ print the summary 2022-10-19 08:49:44 +11:00
RunasSudo 57189990d6
Write Sphinx documentation 2022-10-19 08:49:44 +11:00
RunasSudo 7730ce476a
Make PyCryptodome an optional dependency 2022-10-19 08:49:44 +11:00
RunasSudo 3626d3037f
Disallow specifying a salt for pickle_write_encrypted 2022-10-19 08:49:43 +11:00
RunasSudo 12a0707998
Move ConfidenceInterval to yli.utils 2022-10-19 08:49:43 +11:00
RunasSudo 6d1802fbaf
Add README.md 2022-10-17 20:38:05 +11:00
RunasSudo afc0a724fe
Add README.md 2022-10-17 20:35:11 +11:00
RunasSudo ca521ae529
Make mpmath optional dependency 2022-10-17 20:35:04 +11:00
RunasSudo 7a93355dab
Show covariance matrix type in regression results 2022-10-17 20:34:58 +11:00
RunasSudo b24f675d57
Don't show SciPy optimisation message in regression 2022-10-17 20:34:36 +11:00
RunasSudo 4340be165b
Fix RegressionResult.bayesfactor_beta_zero for categorical terms 2022-10-16 02:49:43 +11:00
RunasSudo 78944c7966
Implement yli.logit_then_regress 2022-10-16 02:31:37 +11:00
RunasSudo 5cd04c3f6c
Report if robust covariance matrix in regression 2022-10-16 02:31:23 +11:00
RunasSudo 6206723713
Add model_kwargs, fit_kwargs and common arguments to yli.regress 2022-10-16 02:31:08 +11:00
RunasSudo f407c5a44f
Move dof_resid below dof_model in regression output 
dof_model is the numerator in the F test so this makes more sense
 2022-10-16 02:30:24 +11:00
RunasSudo 349eebb202
Rename δ -> Δμ for clarity 2022-10-16 01:44:05 +11:00
RunasSudo 8d40e9db8b
Improve formatting of tabular p values 2022-10-15 23:30:41 +11:00
RunasSudo a2442214ed
Observe config.alpha for significance tests and regression 2022-10-15 23:24:29 +11:00
RunasSudo bf5cc434b5
Allow customising p value formatting 2022-10-15 23:11:22 +11:00
RunasSudo 49b9230484
Rename fs -> io 2022-10-15 14:07:54 +11:00
RunasSudo 70fba04b2f
Regression output: Hide boolean reference categories by default if reference category is False 2022-10-15 01:42:06 +11:00
RunasSudo d1249914ff
Allow cols_for_formula and reference category detection to support explicit contrasts 2022-10-15 01:35:49 +11:00
RunasSudo 0391877296
Refactor parsing of Patsy formulas 2022-10-15 00:54:46 +11:00
RunasSudo b2aaaabb0e
Improve pretty printing of regression results 
Pretty print categorical variables and show reference category
 2022-10-14 21:57:22 +11:00
RunasSudo e8e97f6073
Implement anova_oneway 2022-10-14 20:18:25 +11:00
RunasSudo a753761675
Style fixups 2022-10-14 20:08:01 +11:00
RunasSudo 255ad100fd
Refactor fmt_p 2022-10-14 14:48:26 +11:00
RunasSudo 526d361338
Implement RegressionResult.bayesfactor_beta_zero 2022-10-14 14:21:36 +11:00
RunasSudo bb534cb285
vif: Allow computing VIF only for variables in the formula 2022-10-14 14:08:51 +11:00
RunasSudo 461e00df78
Implement PenalisedLogit 2022-10-13 17:23:29 +11:00
RunasSudo 51008296c2
Implement vif 2022-10-13 16:46:53 +11:00
RunasSudo 987520e700
Implement regression helpers 2022-10-13 16:46:53 +11:00
RunasSudo e1051d8aff
Implement utilities for saving/loading pandas DataFrames to/from file 2022-10-13 15:58:27 +11:00
RunasSudo 7e8418eb36
Implement chi2 2022-10-13 15:58:27 +11:00
RunasSudo edc82c1658
Implement mannwhitney 2022-10-13 13:18:51 +11:00
RunasSudo 1fad506a5e
Use pytest.approx in unit tests 2022-10-13 12:53:52 +11:00
RunasSudo 6b43034a50
Implement ttest_ind 2022-10-13 12:53:18 +11:00
RunasSudo 97a01b4e80
Implement ttest_ind 2022-10-11 22:52:42 +11:00
RunasSudo 582cfa5893
Implement transformed_dist 2022-10-09 13:02:06 +11:00