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SciPy distribution for the odds ratio of independent beta variables
In biostatistics, a common effect measure when considering dichotomous exposures and outcomes is the odds ratio. With two proportions $π_0$ and $π_1$, the odds ratio is $ψ = \frac{π_1 / (1 - π_1)}{π_0 / (1 - π_0)}$, as compared to the risk ratio,… »
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Directly computing HDIs from PDFs in SciPy
In Bayesian inference, it is often desired to calculate credible intervals for model parameters. The 2 common choices are the highest posterior density interval (HPD/HDI), and the equal-tailed interval. In many cases, the posterior density must be estimated by simulation, but in some cases the… »
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Beta ratio distribution for SciPy
The quotient of 2 independent beta-distributed random variables has a known distribution, but its closed-form expression is a little hairy [1, 2]. One Python implementation of this distribution is available from Julian Saffer [3], but it suffers from some numerical issues… »
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Bayesian biostatistics procedures matching frequentist confidence intervals
Confidence intervals are commonly misinterpreted as there being, after observing the data, a 95% probability that the true parameter lies within the confidence interval. The usual explanation why this is incorrect is that the true parameter is not random, and so is either inside or… »
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Big list of medical abbreviations
Just a big list of medical abbreviations. Note:
- These abbreviations are based on Australian (and specifically Victorian) usage. Some abbreviations have other meanings elsewhere (e.g. BSL for British Sign Language).
- The inclusion of a abbreviation here does not imply it is recommended to be used.
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Custom fonts in KaTeX
KaTeX is a web-based mathematics typesetting library, similar to the erstwhile untouchable MathJax. Unfortunately, out of the box, KaTeX only supports one font, its default Computer Modern-based font, and does not have built-in functionality for customising this. Thankfully, it is not difficult to achieve… »